Dr.Liu Lab: Bio Nanomechanics, LU

 

 

 

Publications

 

 


Journal Publications
  2012

  J. Xu, J. Yang, J. Yang, N. Huang and Y. Liu, “A Finite Element Analysis of the Mechanical Properties of Overlapping Stents”,Journal of Biomechanical Engineering, submitted, 2013.

  A. Thomas, J. Tan and Y. Liu, “Microfluidic Characterization of Nanoparticle Delivery in Microcirculation: the Influence of Blood Cells and Vascular Geometry”,Langmuir, revision submitted, 2013.

  J. Tan and Y. Liu, “Coupled Particulate and Continuum Model for Nanoparticle Targeted Delivery”,Journal of Computers and Structures, in press, 2013[pdf].

  Y. Wan§, Y. Liu§, P. B. Allen, W. Asghar, M. A. I. Mahmood, Q. Guo, J. Tan, H. Duhon, Y.-t. Kim, A. D. Ellington and S. M. Iqbal, “Capture and Isolation of Cancer Cells with Aptamer-functionalized Glass Bead Array”, Lab on a Chip , 12, 4693–4701, 2012 (§These authors contributed equally to this work)[pdf].

  J. Tan, A. Thomas, and Y. Liu, The Influence of Size, Shape and Vessel Geometry on Nanoparticle Distribution,Journal of Microfluidics and Nanofluidics, 14(1), 77-87, 2013[pdf].

  J. Tan, A. Thomas, and Y. Liu, “Influence of Blood Cell-Particle Interaction on Nanoparticle Targeted Delivery in Microcirculation”,Soft Matter, 8 (6), pp1934-1946, 2012[pdf].

  Y. Liu, S. Shah, and J. Tan, “Computational Modeling of Nanoparticle Targeted Drug Delivery”,Reviews in Nanoscience and Nanotechnology, 1, pp66-83, 2012[pdf].

  Y. Liu, Q. Guo, W. Qiang, and W. Hu, “Electrokinetic Effects on Detection Time of Nanowire Biosensor”,Applied Physics Letters, 100, pp153502, 2012[pdf].

  Y. Liu, J. Tan, A. Thomas, V. Muzykantov, “The shape of things to come: importance of design in nanotechnology for drug delivery”,Therapeutic Delivery, 3(2), pp181-194, 2012 [pdf].

  S. Kona, J.F Dong, Y. Liu, and K. T. Nguyen, “Biodegradable Nanoparticles Mimicking Paltelet Binding Facilitate Targeted Drug Delivery to Endothelial Cells Under Shear Flow”,International Journal of Pharmaceutics,423(2), pp516-524, 2012 [pdf].

  2011

  R. Tian, S. Regonda, J.Gao, Y. Liu, Walter Hu,"Ultrasensitive protein detection using lithographically defined Si multi-nanowire field effect transistors”, Lab on a Chip.,11, 1952-1961, 2011. [pdf]

  A. Ramachandran, Q. Guo, S. Iqbal, Y. Liu,"Coarse-Grained Molecular Dynamics Simulation of DNA Translocation in Chemically-Modified Nanopores”, Journal of Physical Chemistry B., 115 (19), pp 6138–6148, 2011. [pdf]

  Y. Wan, J. Tan, W. Asghar, Y. Kim, Y. Liu, and S. M. Iqbal, “Velocity Effect on Aptamers-based Circulating Tumor Cell Isolation in Microfluidic Devices”,Journal of Physical Chemistry B, 115 (47), pp 13891–13896, 2011 [pdf]

  W. Yeo, K. Lee, Q. Guo, Y. Liu, J. Chung, “Ion Diffusion and DNA Stretching in an Open Nanofluidic System”,Journal of Nanotechnology in Engineering and Medicine, 2(1),pp 011004, 2011[pdf].

  T. Li, W. Hu, Y. Liu, B.D. Sumer, and J. Gao, “Shape-specific Polymeric Nanomedicine: Emerging Opportunities and Challenges”, Experimental Biology and Medicine, 236(1), pp 20-9, 2011. [pdf]

  S. Shah, Y. Liu*, W. Hu, J. Gao, “Modeling Particle Shape-Dependent Dynamics in Nanomedicine”,Jounal of Nanoscience and Nanotechnology, 11(2), pp. 919-928, 2011. [pdf]

  2009

  J. Yang, M. Liang, N. Huang, Y. Liu, “Studying the Non-uniform Expansion of a Stent Influenced by the Balloon”, Journal of Medical Engineering and Technology, 35(5-6), pp 301-305, 2010.

  Y. Liu*, S. Iqbal, “A Mesoscale Model for Molecular Interaction in Functionalized Nanopores”, Applied Physics Letters, 95 (22), pp. 223701, 2009, selected as the Cover Article [pdf]

  A. Ramachandran, Y. Liu*, W. Asghar, S. Iqbal, “Characterization of DNA-Nanopore interaction by Molecular Dynamics”, American Journal of Biomedical Science, 1(4), pp 344-351, 2009 [pdf]

  W. Yeo, J. Chung, Y. Liu, and K. Lee, “Size-Selective Concentration of DNA to a Nanostructured Tip by Using Dielectrophoresis and Capillary Action”, Journal of Physical Chemistry B, 113 (31), pp 10849–10858, 2009 [pdf]

  Y. Liu, S. Iqbal, “Silicon-based Novel Bio-sensing Platforms at the Micro and Nano Scale”,Invited Review Article, Electrochemical Society Transactions, 16 (15), pp. 25-45, 2009. [pdf]

  W. Yeo, J. Chung, S. Liu, Y. Liu, and K. Lee, “Rapid Detection of Mycobacterium Tuberculosis Cells by Using Microtip-Based Immunoassay”, Analytical and Bioanalytical Chemistry, 393(6-7), pp 1593-600, 2009. [pdf]

  2008

  Y. Liu, K. Oh, J.G. Bai, C. Chang, W. Yeo, J. Chung, K. Lee, W.K. Liu, "Manipulation of Nanoparticles and Biomolecules by Electric Field and Surface Tension",Computer Methods in Applied Mechanics and Engineering, 197, pp 2156–2172, 2008. [pdf]

  Y. Liu, S. Iqbal, “A Mesoscale Model for Molecular Interaction in Functionalized Nanopores”, ASME 2008 International Mechanical Engineering Congress (Proceedings of IMECE 2008), IMECE2008-68542, 2008. [pdf]
 
  K. Oh, J. Chung, J. Riley, Y. Liu, and W.K. Liu, "Fluid Flow Assisted Dielectrophoretic Assembly of Nanowires",Langmuir,23, 11932 -11940, 2007. [pdf]
 
  Y. Liu, W.K. Liu, N. Patankar, and T. Belytschko, "Immersed Electrokinetic Finite Element Method", International Journal for Numerical Methods in Engineering, 71, 379-405, 2007. [pdf]
 
  Y. Liu and W.K. Liu, "Rheology of Red Blood Cell Aggregation in Capillary by Computer Simulation", Journal of Computational Physics, 220 (1), pp 139-154, 2006. [pdf]
 
  Y. Liu, J. Chung, W.K. Liu, and R. Ruoff, "Dielectrophoretic Assembly of Nanowires", Journal of Physical Chemistry B, 110 (29), pp 14098-14106, 2006. [pdf]
 
  W.K. Liu, Y. Liu, and D. Farrell et al, "Immersed Finite Element Method and Applications to Biological Systems", Computer Methods in Applied Mechanics and Engineering, 195(1722-1749), 2006. [pdf]
 
  Y. Liu, L. Zhang, X. Wang, and W.K. Liu, "Coupling of Navier–Stokes Equations with Protein Molecular Dynamics and Its Application to Hemodynamics", International Journal for Numerical Methods in Fluids, 46(1237-1252), 2004. [pdf]
 
 
  Y. Liu, S. Shah, "Modeling Adhesion of Micro/Nanoparticles under Flow for Nanomedicine Application", 2009 Summer Bioengineering Conference, Lake Tahoe, CA, 2009
 
  W. Miller, B. Han, Y. Liu, “Tissue-Light Interaction During Monitoring Of Thermal Lesion Using Quantum Dot Mediated Fluorescence Thermometry”, 2009 Summer Bioengineering Conference, Lake Tahoe, CA, 2009
 
  Y. Liu, A. Ramachandran, S. Iqbal, “The Effects of Bio-functionalization on Solid-state Nanopore Transport”, American Physical Society March Meeting, Pittsburgh, PA, 2009
 
  A. Ramachandran, Y. Liu, S. Iqbal, “DNA Translocation in Functionalized Nanopores”, graduate Dean's poster award, ACES symposium, 2009
 
  Y. Liu, S. Shah, W. Hu, J. Gao, “Modeling Particle Shape-Dependent Dynamics in Nanomedicine”,  Proceedings of First Annual ORNL Biomedical Science and Engineering Conference, Oak Ridge, 2009 [Link]
 
  Y. Liu*, S. Shah, W. Hu, J. Gao, “Adhesion Dynamics of Functional Nanoparticles for Targeted Drug Delivery”, Proceedings of the 25th Southern Biomedical Engineering Conference (IFMBE), 2009 [pdf]
 
  J. Yang, M. Liang, N. Huang, Y. Liu, S. Shah, “Studying the non-uniform expansion of a stent influenced by the balloon”, Proceedings of 25th southern biomedical engineering conference (IFMBE), 2009 [Link]
 
  A. Ramachandran, Y. Liu, S. Iqbal, “Characterization of DNA-Nanopore interaction and translocation”, Biotechnology and Bioinformatics Symposium, 2008
 
  Y. Liu, J. Chung and K. Lee, “Size Selective Capturing of Biomolecules and Nanoparticles by Combined Dielectrophoresis and Surface Tension”, 8th World Congress on Computational Mechanics, Venezia, Italy, 2008
 
  Y. Liu,“Fluid Structure Interaction for Biomechanical Applications”, Mechanical & Aerospace Engineering Seminar, UTA, 2008
 
  W. Yeo, J. Chung, K. Lee, Y. Liu, and W.K. Liu, "Hybrid fiber Fabrication Using an AC Electric Field and Capillary Action", Proceedings of IMECE’07, accepted, 2007
 
  Y. Liu, J. Chung, W.K. Liu, "Electrokinetic Assembly and Manipulation of Bio-nanomaterials", Ninth U.S. National Congress on Computational Mechanics, San Francisco, California, 2007
 
  Y. Liu, S. Lichter, W.K. Liu, A. Roxin, "Slip Dynamics at the Liquid/Solid Interface in MD Simulations", 2005 American Physical Society Division of Fluid Dynamics 58th Annual Meeting, Chicago, IL
 
  Y. Liu, J. Chung, W.K. Liu, N. Patankar, and R. Ruoff, "Modeling Electric Field Guided Assembly of Nano/bio-filaments", Eighth U.S. National Congress on Computational Mechanics, Austin, Texas, 2005
 
  Y. Liu, W.K. Liu, N. Patankar, and J. Chung, "Electrohydrodynamics of Immersed Continua", Eighth U.S. National Congress on Computational Mechanics, Austin, Texas, 2005
 
  Y. Liu, L. Zhang, W. Liu, "Studies on Red Blood Cell Aggregations using Immersed Finite Element Method", Seventh U.S. Congress Conference of Computational Mechanics, New Mexico, 2003
 
  Y. Liu, W.K. Liu, L. Zhang, R. Ruoff, "Nanotube Fluidics", Proceedings of 2002 ASME International Mechanical Engineering Congress & Exposition, New Orleans, Louisiana, 2002
 
  L. Zhang, W.K. Liu and Y. Liu, "Molecular Flow Past a Single-Walled Carbon Nanotube", Conference paper of Fifth World Congress on Computational Mechanics 2002, Vienna, Austria
 
  G. Wagner, W.K. Liu, Y. Liu, L. Zhang, R. Ruoff,  "Coupling of Molecular Dynamics with Continuum Mechanics via a Bridging Scale Approach", Proceedings of 2002 ASME International Mechanical Engineering Congress & Exposition, New Orleans, Louisiana
 
Book Chapters
  Y. Liu, , A. Ramachandran, Q. Guo, “Molecular and Coarse-Grained Modeling of DNA-Nanopore Interaction”, Simulations in Nanobiotechnology, CRC Press, Taylor & Francis, 2011
 
  Y. Liu, , S. Shah, J. Tan, “Computational Modeling of Nanoparticle Targeted Drug Delivery”, Cancer nanotechnology, American Scientific Publishers, 2011
 
  W.K. Liu, A. Karpov, Y. Liu, “Computational Nanomechanics”, Handbook of nanophysics, Taylor & Francis, 2009
 
  W.K. Liu, Y. Liu, A. Gerstenberger, D. Farrell, L. Zhang and X. Wang, “Immersed Finite Element Method and applications to Biological systems”, in Finite Element Methods: 1970’s and Beyond, CIMNE, 2004
 
  S. Li and W.K. Liu, Meshfree Particle Methods, Springer, 2004.  Y. Liu contributed chapter 12
 
  W.K. Liu, E. Karpov, H. Park, Nano Mechanics and Materials: Theory, Multiscale Methods and Applications, John Wiley and Sons, 2006.   Y. Liu contributed chapter 10
 
  D. Qian, G.J. Wagner, W.K. Liu, M.F. Yu, Y. Liu, and R.S. Ruoff, "Mechanics and mechanical application of carbon nanotubes", in Encyclopedia of Nanoscience and Nanotechnology, American Scientific Publishers, 2003
 

 

 

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